PYCC 5833
1 - Taxon name
Cystobasidium benthicum f.a.
2 - Classification
Basidiomycota
3 - Strain (species name) changes
Rhodotorula benthica
4 - Status of the strain
Type strain of Cystobasidium benthicum; Type strain of Rhodotorula benthica
6 - Identified by
Nagahama et al.
8 - Accession numbers in other collections
CBS 9124;JCM 10901
11 - PYCC strain status
Open
12 - Mediterranean strain
No
13 - Substrate of isolation
Lamellibrachia sp. (tubeworm)
14 - Category of substrate
Animal
15 - Locality
Sagami Bay, 1156m deep
16 - Country of origin
Japan
19 - Isolated by and date of isolation
T. Nagahama, SY-91
21 - Deposited by
J.P. Sampaio, JCM 10901, Nov. 2003
22 - History
J.P. Sampaio > PYCC
23 - Preservation
Glass beads; 20% Glycerol; -150ºC
24 - Price per culture
85€
26 - Medium for growth
YMA
DNA Sequence
Region
ITS
Sequence Title
AB026001
C1 D-Glucose
+
C2 D-Galactose
-
C3 L-Sorbose
-
C4 D-Glucosamine
-
C5 D-Ribose
-
C6 D-Xylose
+
C7 L-Arabinose
+
C8 D-Arabinose
-
C9 L-Rhamnose
-
C10 Sucrose
+
C11 Maltose
-
C12 a,a-Trehalose
+
C13 Me a-D-Glucoside
W
C14 Cellobiose
+
C15 Salicin
W
C16 Arbutin spliting
+
C17 Melibiose
-
C18 Lactose
-
C19 Raffinose
-
C20 Melezitose
+
C21 Inulin
-
C22 Starch
-
C23 Glycerol
+
C24 Erythritol
-
C25 Ribitol
W
C26 Xylitol
-
C28 D-Glucitol
W
C29 D-Mannitol
-
C30 Galactitol
-
C31 myo-Inositol
-
C32 D-Glucono-1,5-lactone
+
C35 D-Gluconate
+
C36 D-Glucuronate
+
C38 DL-Lactate
W
C39 Succinate
+
C40 Citrate
-
C41 Methanol
-
C42 Ethanol
+
C46 D-glucarate
-
C50 L-Malic acid
+
C51 L-Tartaric acid
-
C52 D-Tartaric acid
-
C53 meso-Tartaric acid
-
C54 Galactaric acid
-
N1 Nitrate
-
N2 Nitrite
-
N3 Ethylamine
+
N4 L-Lysine
W
N5 Cadaverine
+
N6 Creatine
+
N7 Creatinine
+
N8 Glucosamine
-
V1 w/o vitamins
W
T1 Growth at 25ºC
+
T1 Growth at 30ºC
+
T3 Growth at 35ºC
+
O1 Cycloheximide 0.01%
W
O2 Cycloheximide 0.1%
W
P1 Protocatechuic acid
W
P2 Vanillic acid
W
P3 Ferulic acid
+
P4 Veractric acid
W
P5 p-Hidroxybenzoic acid
W
P6 m-Hidroxybenzoic acid
W
P7 Gallic acid
-
P8 Salicylic acid
-
P9 Gentisic acid
-
P10 Catechol
-
P11 Phenol
-
M1 Starch formation
-
M3 Urea hydrolysis
+
M4 Diazonium Blue B reaction
+
Title
Rhodotorula benthica sp. nov. and Rhodotorula calyptogenae sp. nov. novel yeast species from animals collected from the deep-sea floor and Rhodotorula lysiniphila sp. nov. which is related phylogenetically